DESCRIPTION OF VIRUSES

Family Potyviridae

Genus Potyvirus

Genus Potyvirus

Type Species

Potato virus Y

(PVY)

Virion Properties

Morphology

Virions are flexuous filaments, 680-900  nm long and 11-13  nm wide, with helical symmetry and a pitch of about 3.4  nm. Particles of some viruses are longer in the presence of divalent cations than in the presence of EDTA.

Physicochemical and Physical Properties

Virion S20w is 150-160S; density in CsCl is 1.31  g/cm3; E0.1%1  cm, 260  nm = 2.4-2.7.

Nucleic Acid

Virions contain a single molecule of linear, positive sense ssRNA, about 9.7  kb in size (Mr 3.0-3.5 106); virions contain 5% RNA by weight. RNA molecules have poly (A) tracts at their 3-ends. A genome-linked protein of Mr 24 103 is covalently linked at or near the 5 terminus.

Proteins

Virions contain a single CP, Mr 30 to 47 103 in size. The CP of most isolates of the type species, PVY, contains 267 amino acids.

Genome Organization and Replication

Potyvirus genomes are approximately 9.7 kb in size (Fig. 2).

Antigenic Properties

Virions are moderately immunogenic; there are serological relationships among many members. One monoclonal antibody reacts with most aphid-transmitted potyviruses. The CP amino acid sequence homology among aphid-transmitted viruses is 40-70%. Some species are serologically related to species in the genera Rymovirus and Bymovirus.

Biological Properties

Many individual viruses have a narrow host range, but a few infect species in up to 30 host families. The viruses are transmitted by aphids in a non-persistent manner and are transmissible experimentally by mechanical inoculation. Some isolates are inefficiently transmitted by aphids and others are not transmissible by aphids at all. This is apparently due to mutations within the helper component and/or CP cistrons. Some viruses are seed-transmitted.

List of Species Demarcating Criteria in the Genus

Genome sequence relatedness.

CP amino acid sequence identity less than approximately 80%,

Nucleotide sequence identity of less than 85% over whole genome,

Different polyprotein cleavage sites.

Natural host range.

Host range may be related to species but usually not helpful in identifying species. May delineate strains.

Pathogenicity and cytopathology.

Different inclusion body morphology,

Lack of cross-protection,

Seed transmissibility, or lack thereof,

Some aspects of host reaction may be useful (e.g., resistance genes, different responses in key host species).

Mode of transmission.

Different primary vectors, but vector species not of use in identification to virus species.

Antigenic properties.

Serological differences.

List of Species in the Genus

Official virus species names are in italics. Tentative virus species names, alternative names ( ), strains or serotypes are not italicized. Virus names, CMI/AAB description number ( ), genome sequence accession numbers [ ], and assigned abbreviations ( ) are:

Species in the Genus

Alpinia mosaic virus

(AlpMV)

Alstroemeria mosaic virus

(AlMV)

Amaranthus leaf mottle virus

(AmLMV)

Araujia mosaic virus

(ArjMV)

Artichoke latent virus

(ArLV)

Asparagus virus 1

(AV-1)

Banana bract mosaic virus

(BBrMV)

Bean common mosaic virus (73, 337)

(BCMV)

(Azuki bean mosaic virus)

(Blackeye cowpea mosaic virus) (305)

(Dendrobium mosaic virus)

(Guar green sterile virus)

(Peanut stripe virus)

[U05771, U34972]

(Peanut mild mottle virus)

(Peanut chlorotic ring mottle virus)

Bean common mosaic necrosis virus

[U19287]

(BCMNV)

(serotype A of BCMV)

Bean yellow mosaic virus

[D83749, U47033](BYMV)

(Crocus tomasinianus virus)

(White lupin mosaic virus)

(Pea mosaic virus) (40)

Beet mosaic virus (53)

(BtMV)

(Dioscorea alata ring mottle virus)

Bidens mottle virus (209)

(BiMoV)

Calanthe mild mosaic virus

(CalMMV)

Cardamom mosaic virus

(CdMV)

Carnation vein mottle virus (78)

(CVMoV)

Carrot thin leaf virus (218)

(CTLV)

Celery mosaic virus (50)

(CeMV)

Ceratobium mosaic virus

(CerMV)

Chilli veinal mottle virus

(ChiVMV)

(Pepper vein banding mosaic virus)

Clover yellow vein virus (131)

(ClYVV)

(Pea necrosis virus)

(Statice virus Y)

Cocksfoot streak virus (59)

(CSV)

Colombian datura virus

(CDV)

Commelina mosaic virus

(ComMV)

Cowpea aphid-borne mosaic virus (134)

(CABMV)

(Sesame mosaic virus)

(South African passiflora virus)

Cowpea green vein banding virus

(CGVBV)

Dasheen mosaic virus (191)

(DsMV)

Datura shoestring virus

(DSSV)

Endive necrotic mosaic virus

(ENMV)

Freesia mosaic virus

(FreMV)

Gloriosa stripe mosaic virus

(GSMV)

Groundnut eyespot virus

(GEV)

Guinea grass mosaic virus (190)

(GGMV)

Helenium virus Y

(HVY)

Henbane mosaic virus (95)

(HMV)

Hippeastrum mosaic virus (117)

(HiMV)

Hyacinth mosaic virus

(HyaMV)

Iris fulva mosaic virus (310)

(IFMV)

Iris mild mosaic virus (116, 324)

(IMMV)

Iris severe mosaic virus (147, 338)

(ISMV)

(Bearded iris mosaic virus) (147, 338)

Johnsongrass mosaic virus

[Z26920]

(JGMV)

Kalanchoë mosaic virus

(KMV)

Konjac mosaic virus

(KoMV)

Leek yellow stripe virus (240)

(LYSV)

(Garlic virus)

(Garlic virus 2)

Lettuce mosaic virus (9)

[X97704, X97705]

(LMV)

Lily mottle virus

(LMoV)

Maize dwarf mosaic virus

(MDMV)

Moroccan watermelon mosaic virus

(MWMV)

Narcissus degeneration virus

(NDV)

Narcissus late season yellows virus

(NLSYV)

(Jonquil mild mosaic virus)

Narcissus yellow stripe virus (76)

(NYSV)

Nerine yellow stripe virus

(NeYSV)

Nothoscordum mosaic virus

(NoMV)

Onion yellow dwarf virus (158)

(OYDV)

Ornithogalum mosaic virus

(OrMV)

Papaya ringspot virus

[S46722, X67673, X97251]

(PRSV)

(Watermelon mosaic virus 1) (63, 84, 292)

Parsnip mosaic virus (91)

(ParMV)

Passion fruit woodiness virus (122)

(PWV)

Pea seed-borne mosaic virus (146)

[D10930, D01152, X89997]

(PSbMV)

Peanut mottle virus (141)

(PeMoV)

Pepper mottle virus (253)

[M96425]

(PepMoV)

Pepper severe mosaic virus

(PepSMV)

Pepper veinal mottle virus (104)

(PVMV)

Peru tomato mosaic virus (255)

(PTV)

Petunia flower mottle virus

(PetFMV)

Plum pox virus (70)

[D00424, D13751, M92280, X16415, X81083]

(PPV)

Pokeweed mosaic virus (97)

(PkMV)

Potato virus A (54)

[Z21670]

(PVA)

Potato virus V (316)

(PVV)

Potato virus Y (37, 242)

[D00441, M95491, U09509, X12456, X97895]

(PVY)

Rembrandt tulip breaking virus

(ReTBV)

Shallot yellow stripe virus

(SYSV)

(Welsh onion yellow stripe virus)

Sorghum mosaic virus

(SrMV)

Soybean mosaic virus (93)

[S42280]

(SMV)

Sugarcane mosaic virus (88, 341)

(SCMV)

Sweet potato feathery mottle virus

[D86371]

(SPFMV)

(Sweet potato russet crack virus)

(Sweet potato virus A)

(Sweet potato chlorotic leafspot virus)

(Sweet potato internal cork virus)

Sweet potato latent virus

(SPLV)

Tamarillo mosaic virus

(TamMV)

Telfairia mosaic virus

(TeMV)

Tobacco etch virus (55, 258)

[L38714, M11458, M15239]

(TEV)

Tobacco vein banding mosaic virus

(TVBMV)

Tobacco vein mottling virus (325)

[U38621, X04083]

(TVMV)

Tropaeolum mosaic virus

(TrMV)

(Nasturtium mosaic virus)

Tuberose mild mosaic virus

(TuMMV)

Tulip breaking virus (71)

(TBV)

Turnip mosaic virus (8)

[D10927, D83184]

(TuMV)

(Tulip top breaking virus)

(Tulip chlorotic blotch virus)

Watermelon mosaic virus (63,293)

(WMV)

(Vanilla necrosis virus)

(Watermelon mosaic virus 2)

Wild potato mosaic virus

(WPMV)

Wisteria vein mosaic virus

(WVMV)

Yam mosaic virus (314)

[U42596]

(YMV)

(Dioscorea green banding virus)

Zucchini yellow fleck virus

(ZYFV)

Zucchini yellow mosaic virus (282)

[L29569, L31350, AF014811]

(ZYMV)

Tentative Species in the Genus

Aphid-borne (aphid transmission not confirmed; name inadequate but denotes plant species with a report of a potyvirus infection)

Alstroemeria streak virus

(AlStV)

Amazon lily mosaic virus

(ALiMV)

Aneilema mosaic virus

(AneMV)

Anthoxanthum mosaic virus

(AntMV)

Aquilegia necrotic ringspot virus

(AqNRSV)

Arracacha virus Y

(AVY)

Asystasia gangetica mottle virus

(AGMoV)

Bidens mosaic virus

(BiMV)

Bramble yellow mosaic virus

(BrmYMV)

Bryonia mottle virus

(BryMoV)

Canary reed mosaic virus

(CRMV)

Canavalia maritima mosaic virus

(CnMMV)

Carrot mosaic virus

(CtMV)

Cassia yellow spot virus

(CasYSV)

Celery yellow mosaic virus

(CeYMV)

Chickpea bushy dwarf virus

(CpBDV)

Chickpea filiform virus

(CpFV)

Clitoria yellow mosaic virus

(CtYMV)

Cowpea rugose mosaic virus

(CPRMV)

Crinum mosaic virus

(CriMV)

Croatian clover virus

(CroCV)

Cypripedium chlorotic streak virus

(CypCSV)

Daphne virus Y

(DVY)

Datura virus 437

(DV-437)

Datura distortion mosaic virus

(DDMV)

Datura mosaic virus

(DTMV)

Datura necrosis virus

(DNV)

Desmodium mosaic virus

(DesMV)

Dioscorea trifida virus

(DTV)

Dipladenia mosaic virus

(DipMV)

Dock mottling mosaic virus

(DMMV)

Eggplant green mosaic virus

(EGMV)

Eggplant severe mottle virus

(ESMoV)

Euphorbia ringspot virus

(EuRSV)

Fig leaf chlorosis virus

(FigLCV)

Guar symptomless virus

(GSLV)

Habenaria mosaic virus

(HaMV)

Holcus streak virus

(HSV)

Hungarian datura innoxia virus

(HDIV)

Indian pepper mottle virus

(IPMoV)

Isachne mosaic virus

(IsaMV)

Kennedya virus Y

(KVY)

Lily mild mottle virus

(LiMMoV)

Malva vein clearing virus

(MVCV)

Marigold mottle virus

(MaMoV)

Melilotus mosaic virus

(MeMV)

Melon vein-banding mosaic virus

(MVBMV)

Mungbean mosaic virus

(MbMV)

Mungbean mottle virus

(MMoV)

Nerine virus

(NV)

Nerine virus Y

(NVY)

Palm mosaic virus

(PalMV)

Papaya leaf distortion mosaic virus

(PLDMV)

Passion fruit mottle virus

(PFMoV)

Passion fruit ringspot virus

(PFRSV)

Patchouli mottle virus

(PatMoV)

Peanut green mottle virus

(PeGMoV)

Pecteilis mosaic virus

(PcMV)

Pepper mild mosaic virus

(PMMV)

Pepper vein banding virus

(PVBV)

Perilla mottle virus

(PerMoV

Plantain virus 7

(PlV-7)

Pleioblastus mosaic virus

(PleMV)

Poplar decline virus

(PopDV)

Primula mosaic virus

(PrMV)

Primula mottle virus

(PrMoV)

Radish vein clearing virus

(RaVCV)

Ranunculus mottle virus

(RanMoV)

Rudbeckia mosaic virus

(RuMV)

Sri Lankan passion fruit mottle virus

(SLPMoV)

Sunflower mosaic virus

(SuMV)

Sweet potato vein mosaic virus

(SPVMV)

Sweet potato mild speckling virus

(SPMSV)

Sword bean distortion mosaic virus

(SBDMV)

Teasel mosaic virus

(TeaMV)

Tobacco wilt virus

(TWV)

Taro feathery mottle virus

(TFMoV)

Tongan vanilla virus

(TVV)

Tradescantia mosaic virus

(TraMV)

Trichosanthes mottle virus

(TrMoV)

Tropaeolum virus 1

(TV-1)

Tropaeolum virus 2

(TV-2)

Tulip band breaking virus

(TBBV)

Ullucus mosaic virus

(UMV)

Vallota mosaic virus

(ValMV)

Vanilla mosaic virus

(VanMV)

White bryony virus

(WBV)

Zoysia mosaic virus

(ZoMV)


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